MyMpn Project

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Found 580 operons.

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Operons have been defined by a combination of tiling array data and RNA-seq to determine the RNA boundaries, resulting in a list of "reference operons". These were further analyzed using co-expression data from microarray and tiling array experiments and thus subdivided in putative suboperons. Bicistronic operons were split if the genes showed a correlation below 0.6. Operons with 3 or more members are further subdivided by applying the algorithm PAM (Partitioning Around Medoids) to the dissimilarity matrix. The link to the Genome Browser allows to visualize these gene clusters and see if the correspond to predicted promoters and terminators.
See also: Güell et al., 2009

Genome sequence on NCBI Related publications: Himmelreich et al., 1996, Dandekar et al., 2000

Query Result

Operon name	Transcript position	[Suboperon:Genes]	MyGBrowser	GBrowse
OP1	547-2720 +	[SUBOP1: MPN001 MPN002 ]
OP2	2800-11960 +	[SUBOP2: MPN003 MPN004 ] [SUBOP3: MPN005 MPN006 MPN007 MPN008 MPN009 ]
OP3	12342-12750 +	[SUBOP4: MPN010 ]
OP4	13390-14200 +	[SUBOP5: ]
OP5	15138-15800 +	[SUBOP6: MPN013 ]
OP6	Undefined limits	[SUBOP7: MPN014 ]
OP7	15895-16000 +	[SUBOP8: ]
OP8	19314-29803 +	[SUBOP10: MPN020 ] [SUBOP11: MPN021 MPN022 MPN023 ] [SUBOP9: MPN018 MPN019 ]
OP9	29803-32900 +	[SUBOP12: MPN024 MPN025 MPN026 MPN035 ]
OP10	33046-36000 +	[SUBOP13: MPN028 MPN036 ] [SUBOP14: MPN029 MPN030 MPN031 MPN037 ]
OP11	41335-43400 +	[ : MPN035 ]
OP12	43508-45640 +	[ : MPN036 MPN037 ]
OP13	47103-48050 +	[SUBOP15: MPN039 MPN041 MPN042 ]
OP14	51590-52600 +	[SUBOP16: MPN043 ]
OP15	53073-56000 +	[SUBOP17: MPN045 ] [SUBOP18: MPN046 ]
OP16	56050-57350 +	[SUBOP19: MPN047 ]
OP17	57400-59488 +	[SUBOP20: MPN048 ]
OP18	59488-61495 +	[SUBOP21: MPN049 ]
OP19	61723-62040 +	[SUBOP22: ]
OP20	64803-67250 +	[SUBOP23: MPN052 MPN053 ]
OP21	Undefined limits	[SUBOP24: MPN054 ]
OP22	70382-75203 +	[SUBOP25: MPN055 MPN056 MPN057 MPN058 ]
OP23	75203-77100 +	[SUBOP26: MPN059 MPN060 ]
OP24	77198-78100 +	[SUBOP27: ]
OP25	79008-83850 +	[SUBOP28: MPN062 MPN063 MPN064 MPN065 ] [SUBOP29: MPN066 ]
OP26	88180-88340 +	[SUBOP30: MPN075 ]
OP27	88738-88840 +	[SUBOP31: ]
OP28	91205-92600 +	[SUBOP32: ]
OP29	93165-96171 +	[SUBOP33: MPN078 ] [SUBOP34: MPN079 ]
OP30	96173-101980 +	[SUBOP35: MPN080 ] [SUBOP36: MPN081 ]
OP31	101980-107250 +	[SUBOP37: MPN082 MPN083 MPN084 ]
OP32	107273-108690 +	[SUBOP38: MPN085 ]
OP33	108600-108680 +	[SUBOP39: ]
OP34	Undefined limits	[SUBOP40: MPN086 ]
OP35	109300-109420 +	[SUBOP41: MPN087 ]
OP36	110230-111350 +	[SUBOP42: MPN088 ]
OP37	111470-112600 +	[SUBOP43: MPN089 ]
OP38	112710-116000 +	[SUBOP44: MPN090 ] [SUBOP45: MPN091 ] [SUBOP46: MPN092 ] [SUBOP47: MPN093 ]
OP39	116435-0 +	[SUBOP48: MPN094 ]
OP40	118248-123130 +	[SUBOP49: ]
OP41	123250-124998 +	[SUBOP50: MPN095 MPN096 ]
OP42	124998-127400 +	[SUBOP51: MPN097 ] [SUBOP52: MPN098 ]
OP43	Undefined limits	[SUBOP53: MPN099 ]
OP44	129608-130007 +	[SUBOP54: MPN100 ]
OP45	Undefined limits	[SUBOP55: MPN101 ]
OP46	Undefined limits	[SUBOP56: MPN102 ]
OP47	134212-135300 +	[SUBOP57: MPN104 ]
OP48	134985-135350 +	[SUBOP58: ]
OP49	135718-141600 +	[SUBOP59: MPN105 MPN106 MPN107 MPN108 ]
OP50	141940-143180 +	[SUBOP60: MPN109 ] [SUBOP61: MPN110 ]